BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F04LP1|AL426239
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1198 1481 0.0
>3x_Contig1198
Length = 5263
Score = 1481 bits (746), Expect = 0.0
Identities = 758/762 (99%), Gaps = 1/762 (0%)
Strand = Plus / Plus
Query: 1 aacaacaactacagactgcgtgttttagaccataatagagtactatagcaatggcggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4478 aacaacaactacagactgcgtgttttagaccataatagagtactatagcaatggcggaga 4537
Query: 61 atggccaaatgatcacaataggaggaatgtatatcgttcttctgaattaatatagtgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4538 atggccaaatgatcacaataggaggaatgtatatcgttcttctgaattaatatagtgaaa 4597
Query: 121 cagccgttcattacaccagtttgtgatcccatttgtttctttttgctcatcagtcgagga 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4598 cagccgtacattacaccagtttgtgatcccatttgtttctttttgctcatcagtcgagga 4657
Query: 181 attcgaaaattttcaaaaattgaaaaactaaagaaaatgatttcaagagactaacctcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4658 attcgaaaattttcaaaaattgaaaaactaaagaaaatgatttcaagagactaacctcat 4717
Query: 241 ctcatctcgttccatctcatctcactttatgataaaactttttttagacttggacttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4718 ctcatctcgttccatctcatctcactttatgataaaactttttttagacttggacttgat 4777
Query: 301 ccgatcttatttctagtcttaaaacaccagattcaagcgagcttttcattcttgcaaggr 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4778 ccgatcttatttctagtcttaaaacaccagattcaagcgagcttttcattcttgcaagga 4837
Query: 361 acttgaactgacccaatcggatacttcacttcatattataaagaaataatgtctgctcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4838 acttgaactgacccaatcggatacttcacttcatattataaagaaataatgtctgctcca 4897
Query: 421 aacccaaaggctttcccattggctgatgccaccttgtcccaacaaatcttggatgttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4898 aacccaaaggctttcccattggctgatgccaccttgtcccaacaaatcttggatgttgtt 4957
Query: 481 caacaagcttccaacatgagacaattgaagaagggtgctaacgaagctaccaagactttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4958 caacaagcttccaacatgagacaattgaagaagggtgctaacgaagctaccaagactttg 5017
Query: 541 aaccgtggtatttccgaattcattatcatggctgctgactgtgaacctattgaratcttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5018 aaccgtggtatttccgaattcattatcatggctgctgactgtgaacctattgaaatcttg 5077
Query: 601 ttgcacttgccattgttgtgtgaagataagaacgttccatacgtctttgttccatccaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5078 ttgcacttgccattgttgtgtgaagataagaacgttccatacgtctttgttccatccaga 5137
Query: 661 actgctttgggtagagcttgtggtgtttccagaccagttattgctgcttctattaccact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5138 actgctttgggtagagcttgtggtgtttccagaccagttattgctgcttctattaccact 5197
Query: 721 aacgatgcttctgctatcaaaagccaaatctatgccgttaag 762
||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5198 aacgatgcttctgctatcaaaagccaaatct-tgccgttaag 5238
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7767
Number of Sequences: 1807
Number of extensions: 7767
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)